RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 NISCHQ9Y2I1 1504 aa16.02■□□□□ 0.16
TRIO-214ENST00000509967 DCAF8L2P0C7V8 631 aa15.42■□□□□ 0.06
TRIO-214ENST00000509967 SUPT5HO00267 1087 aaKnown RBP14.92□□□□□ -0.02
TRIO-214ENST00000509967 SHROOM4Q9ULL8 1493 aa14.64□□□□□ -0.07
TRIO-214ENST00000509967 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
TRIO-214ENST00000509967 APLP2Q06481 763 aa14.42□□□□□ -0.1
TRIO-214ENST00000509967 ZEB1P37275 1124 aaPredicted RBP14.41□□□□□ -0.1
TRIO-214ENST00000509967 FAM9AQ8IZU1 332 aaPredicted RBP14.28□□□□□ -0.12
TRIO-214ENST00000509967 CENPBP07199 599 aaPredicted RBP14.1□□□□□ -0.15
TRIO-214ENST00000509967 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
TRIO-214ENST00000509967 PCGF6Q9BYE7 350 aa14.02□□□□□ -0.16
TRIO-214ENST00000509967 MYT1Q01538 1121 aa13.96□□□□□ -0.17
TRIO-214ENST00000509967 ABCC9O60706 1549 aa13.94□□□□□ -0.18
TRIO-214ENST00000509967 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
TRIO-214ENST00000509967 HRCP23327 699 aa13.92□□□□□ -0.18
TRIO-214ENST00000509967 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
TRIO-214ENST00000509967 TRIM26Q12899 539 aaPredicted RBP13.84□□□□□ -0.19
TRIO-214ENST00000509967 UBTFP17480 764 aaKnown RBP13.79□□□□□ -0.2
TRIO-214ENST00000509967 NEFLP07196 543 aa13.67□□□□□ -0.22
TRIO-214ENST00000509967 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
TRIO-214ENST00000509967 CHIC1Q5VXU3 224 aa13.65□□□□□ -0.22
TRIO-214ENST00000509967 PPARGC1BQ86YN6 1023 aaKnown RBP13.58□□□□□ -0.24
TRIO-214ENST00000509967 TTBK1Q5TCY1 1321 aaPredicted RBP13.54□□□□□ -0.24
TRIO-214ENST00000509967 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRIO-214ENST00000509967 CCDC180Q9P1Z9 1646 aa13.49□□□□□ -0.25
TRIO-214ENST00000509967 ATP1B4Q9UN42 357 aaPredicted RBP13.49□□□□□ -0.25
TRIO-214ENST00000509967 RANGAP1P46060 587 aaPredicted RBP13.44□□□□□ -0.26
TRIO-214ENST00000509967 ZCCHC6Q5VYS8 1495 aaKnown RBP13.37□□□□□ -0.27
TRIO-214ENST00000509967 LOC105371045A0A1W2PR82 267 aa13.27□□□□□ -0.29
TRIO-214ENST00000509967 YTHDC1Q96MU7 727 aaKnown RBP13.24□□□□□ -0.29
TRIO-214ENST00000509967 DCAF1Q9Y4B6 1507 aa13.21□□□□□ -0.29
TRIO-214ENST00000509967 RB1CC1Q8TDY2 1594 aa13.17□□□□□ -0.3
TRIO-214ENST00000509967 DIEXFQ68CQ4 756 aaKnown RBP13.17□□□□□ -0.3
TRIO-214ENST00000509967 CLSPNQ9HAW4 1339 aa13.17□□□□□ -0.3
TRIO-214ENST00000509967 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
TRIO-214ENST00000509967 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
TRIO-214ENST00000509967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
TRIO-214ENST00000509967 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.32
TRIO-214ENST00000509967 ITGAEP38570 1179 aa13.08□□□□□ -0.32
TRIO-214ENST00000509967 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
TRIO-214ENST00000509967 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
TRIO-214ENST00000509967 NACADO15069 1562 aa13.05□□□□□ -0.32
TRIO-214ENST00000509967 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.33
TRIO-214ENST00000509967 EEA1Q15075 1411 aa13.01□□□□□ -0.33
TRIO-214ENST00000509967 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
TRIO-214ENST00000509967 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
TRIO-214ENST00000509967 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
TRIO-214ENST00000509967 ANP32CO43423 234 aa12.97□□□□□ -0.33
TRIO-214ENST00000509967 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.34
TRIO-214ENST00000509967 MYT1LQ9UL68 1186 aa12.94□□□□□ -0.34
TRIO-214ENST00000509967 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
TRIO-214ENST00000509967 POLR3GLQ9BT43 218 aa12.9□□□□□ -0.34
TRIO-214ENST00000509967 TRIM52Q96A61 297 aa12.9□□□□□ -0.35
TRIO-214ENST00000509967 CDK11AQ9UQ88 783 aaPredicted RBP12.89□□□□□ -0.35
TRIO-214ENST00000509967 NEUROD1Q13562 356 aa12.79□□□□□ -0.36
TRIO-214ENST00000509967 GOLGA3Q08378 1498 aa12.76□□□□□ -0.37
TRIO-214ENST00000509967 RSF1Q96T23 1441 aaPredicted RBP12.73□□□□□ -0.37
TRIO-214ENST00000509967 TONSLQ96HA7 1378 aa12.73□□□□□ -0.37
TRIO-214ENST00000509967 BAZ1AQ9NRL2 1556 aaPredicted RBP12.69□□□□□ -0.38
TRIO-214ENST00000509967 CLIP1P30622 1438 aa12.69□□□□□ -0.38
TRIO-214ENST00000509967 ZBTB47Q9UFB7 747 aaPredicted RBP12.67□□□□□ -0.38
TRIO-214ENST00000509967 CEP164Q9UPV0 1460 aa12.67□□□□□ -0.38
TRIO-214ENST00000509967 TNIKQ9UKE5 1360 aa12.66□□□□□ -0.38
TRIO-214ENST00000509967 NEFMP07197 916 aa12.66□□□□□ -0.38
TRIO-214ENST00000509967 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
TRIO-214ENST00000509967 FBLN2P98095 1184 aa12.65□□□□□ -0.38
TRIO-214ENST00000509967 ANP32AP39687 249 aaKnown RBP12.63□□□□□ -0.39
TRIO-214ENST00000509967 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
TRIO-214ENST00000509967 CEP162Q5TB80 1403 aa12.6□□□□□ -0.39
TRIO-214ENST00000509967 BAZ1BQ9UIG0 1483 aaKnown RBP12.57□□□□□ -0.4
TRIO-214ENST00000509967 KIF27Q86VH2 1401 aa12.57□□□□□ -0.4
TRIO-214ENST00000509967 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
TRIO-214ENST00000509967 ZNF326Q5BKZ1 582 aaKnown RBP12.56□□□□□ -0.4
TRIO-214ENST00000509967 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
TRIO-214ENST00000509967 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.52□□□□□ -0.41
TRIO-214ENST00000509967 CNGB1Q14028 1251 aaPredicted RBP12.51□□□□□ -0.41
TRIO-214ENST00000509967 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
TRIO-214ENST00000509967 TIMELESSQ9UNS1 1208 aa12.5□□□□□ -0.41
TRIO-214ENST00000509967 FHAD1B1AJZ9 1412 aa12.49□□□□□ -0.41
TRIO-214ENST00000509967 BCANQ96GW7 911 aa12.48□□□□□ -0.41
TRIO-214ENST00000509967 ERCC6Q03468 1493 aa12.47□□□□□ -0.41
TRIO-214ENST00000509967 UPF2Q9HAU5 1272 aaKnown RBP12.46□□□□□ -0.41
TRIO-214ENST00000509967 TSPY4P0CV99 314 aa12.46□□□□□ -0.41
TRIO-214ENST00000509967 TSPY10P0CW01 314 aa12.46□□□□□ -0.41
TRIO-214ENST00000509967 ZNF777Q9ULD5 760 aaPredicted RBP12.44□□□□□ -0.42
TRIO-214ENST00000509967 HNRNPUQ00839 825 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRIO-214ENST00000509967 EIF4G2P78344 907 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRIO-214ENST00000509967 FKBP8Q14318 412 aa12.42□□□□□ -0.42
TRIO-214ENST00000509967 EIF5BO60841 1220 aaKnown RBP12.41□□□□□ -0.42
TRIO-214ENST00000509967 SMARCA2P51531 1590 aa12.41□□□□□ -0.42
TRIO-214ENST00000509967 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRIO-214ENST00000509967 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.43
TRIO-214ENST00000509967 MIER1Q8N108 512 aa12.39□□□□□ -0.43
TRIO-214ENST00000509967 ANP32BQ92688 251 aaKnown RBP12.39□□□□□ -0.43
TRIO-214ENST00000509967 SLC24A1O60721 1099 aa12.39□□□□□ -0.43
TRIO-214ENST00000509967 TMC1Q8TDI8 760 aa12.39□□□□□ -0.43
TRIO-214ENST00000509967 DDX10Q13206 875 aaKnown RBP12.39□□□□□ -0.43
TRIO-214ENST00000509967 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
TRIO-214ENST00000509967 WDR43Q15061 677 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRIO-214ENST00000509967 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms