Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDHR4A6H8M9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.75■■□□□ 1.23
CDHR4A6H8M9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
CDHR4A6H8M9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDHR4A6H8M9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDHR4A6H8M9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDHR4A6H8M9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDHR4A6H8M9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.74■■□□□ 1.23
CDHR4A6H8M9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.74■■□□□ 1.23
CDHR4A6H8M9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDHR4A6H8M9 AC148477.6-201ENST00000623746 465 ntBASIC22.74■■□□□ 1.23
CDHR4A6H8M9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.74■■□□□ 1.23
CDHR4A6H8M9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDHR4A6H8M9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.73■■□□□ 1.23
CDHR4A6H8M9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDHR4A6H8M9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDHR4A6H8M9 AC142472.1-201ENST00000612013 1741 ntBASIC22.73■■□□□ 1.23
CDHR4A6H8M9 CR559946.2-201ENST00000623684 991 ntBASIC22.72■■□□□ 1.23
CDHR4A6H8M9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDHR4A6H8M9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDHR4A6H8M9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDHR4A6H8M9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDHR4A6H8M9 MIR219A2-201ENST00000608502 1504 ntBASIC22.72■■□□□ 1.23
CDHR4A6H8M9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.71■■□□□ 1.23
CDHR4A6H8M9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.71■■□□□ 1.23
CDHR4A6H8M9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDHR4A6H8M9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDHR4A6H8M9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDHR4A6H8M9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDHR4A6H8M9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.7■■□□□ 1.23
CDHR4A6H8M9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.7■■□□□ 1.22
CDHR4A6H8M9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDHR4A6H8M9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDHR4A6H8M9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.7■■□□□ 1.22
CDHR4A6H8M9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDHR4A6H8M9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CDHR4A6H8M9 HLA-V-202ENST00000446817 847 ntBASIC22.68■■□□□ 1.22
CDHR4A6H8M9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.68■■□□□ 1.22
CDHR4A6H8M9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.68■■□□□ 1.22
CDHR4A6H8M9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CDHR4A6H8M9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.68■■□□□ 1.22
CDHR4A6H8M9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDHR4A6H8M9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CDHR4A6H8M9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDHR4A6H8M9 AC091060.1-201ENST00000623524 1766 ntBASIC22.67■■□□□ 1.22
CDHR4A6H8M9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CDHR4A6H8M9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.67■■□□□ 1.22
CDHR4A6H8M9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR4A6H8M9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR4A6H8M9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CDHR4A6H8M9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.66■■□□□ 1.22
CDHR4A6H8M9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR4A6H8M9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CDHR4A6H8M9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR4A6H8M9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR4A6H8M9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR4A6H8M9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR4A6H8M9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.65■■□□□ 1.22
CDHR4A6H8M9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CDHR4A6H8M9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR4A6H8M9 MIR3648-2-201ENST00000581792 180 ntBASIC22.65■■□□□ 1.22
CDHR4A6H8M9 MIR3648-1-201ENST00000615959 180 ntBASIC22.65■■□□□ 1.22
CDHR4A6H8M9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR4A6H8M9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDHR4A6H8M9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.64■■□□□ 1.22
CDHR4A6H8M9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.64■■□□□ 1.21
CDHR4A6H8M9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
CDHR4A6H8M9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDHR4A6H8M9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.63■■□□□ 1.21
CDHR4A6H8M9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDHR4A6H8M9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.63■■□□□ 1.21
CDHR4A6H8M9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDHR4A6H8M9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDHR4A6H8M9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.62■■□□□ 1.21
CDHR4A6H8M9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDHR4A6H8M9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDHR4A6H8M9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.62■■□□□ 1.21
CDHR4A6H8M9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.62■■□□□ 1.21
CDHR4A6H8M9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDHR4A6H8M9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDHR4A6H8M9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDHR4A6H8M9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDHR4A6H8M9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDHR4A6H8M9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDHR4A6H8M9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CDHR4A6H8M9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDHR4A6H8M9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.6■■□□□ 1.21
CDHR4A6H8M9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
CDHR4A6H8M9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.6■■□□□ 1.21
CDHR4A6H8M9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDHR4A6H8M9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDHR4A6H8M9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.59■■□□□ 1.21
CDHR4A6H8M9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.59■■□□□ 1.21
CDHR4A6H8M9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDHR4A6H8M9 AC145676.1-201ENST00000514988 2004 ntBASIC22.58■■□□□ 1.21
CDHR4A6H8M9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
CDHR4A6H8M9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.21
CDHR4A6H8M9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDHR4A6H8M9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CDHR4A6H8M9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms