Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 AC092803.2-201ENST00000564287 1899 ntBASIC22.29■■□□□ 1.16
TMEM129A0AVI4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.29■■□□□ 1.16
TMEM129A0AVI4 LINC01971-201ENST00000617888 1048 ntBASIC22.29■■□□□ 1.16
TMEM129A0AVI4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TMEM129A0AVI4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TMEM129A0AVI4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TMEM129A0AVI4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TMEM129A0AVI4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TMEM129A0AVI4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
TMEM129A0AVI4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.28■■□□□ 1.16
TMEM129A0AVI4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMEM129A0AVI4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMEM129A0AVI4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMEM129A0AVI4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TMEM129A0AVI4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.27■■□□□ 1.16
TMEM129A0AVI4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.27■■□□□ 1.16
TMEM129A0AVI4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
TMEM129A0AVI4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.26■■□□□ 1.15
TMEM129A0AVI4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM129A0AVI4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM129A0AVI4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM129A0AVI4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
TMEM129A0AVI4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.25■■□□□ 1.15
TMEM129A0AVI4 DUX4L11-201ENST00000611504 1267 ntBASIC22.25■■□□□ 1.15
TMEM129A0AVI4 DUX4L12-201ENST00000614593 1267 ntBASIC22.25■■□□□ 1.15
TMEM129A0AVI4 DUX4L14-201ENST00000621227 1267 ntBASIC22.25■■□□□ 1.15
TMEM129A0AVI4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM129A0AVI4 AC135983.2-203ENST00000454486 1613 ntBASIC22.24■■□□□ 1.15
TMEM129A0AVI4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.24■■□□□ 1.15
TMEM129A0AVI4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
TMEM129A0AVI4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
TMEM129A0AVI4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.24■■□□□ 1.15
TMEM129A0AVI4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
TMEM129A0AVI4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.23■■□□□ 1.15
TMEM129A0AVI4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.23■■□□□ 1.15
TMEM129A0AVI4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TMEM129A0AVI4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TMEM129A0AVI4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
TMEM129A0AVI4 AC093323.1-202ENST00000635031 2045 ntBASIC22.22■■□□□ 1.15
TMEM129A0AVI4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM129A0AVI4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM129A0AVI4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM129A0AVI4 LINC00273-201ENST00000539813 1452 ntBASIC22.22■■□□□ 1.15
TMEM129A0AVI4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.21■■□□□ 1.15
TMEM129A0AVI4 HLA-V-202ENST00000446817 847 ntBASIC22.21■■□□□ 1.15
TMEM129A0AVI4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.21■■□□□ 1.15
TMEM129A0AVI4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
TMEM129A0AVI4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
TMEM129A0AVI4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TMEM129A0AVI4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.2■■□□□ 1.14
TMEM129A0AVI4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.2■■□□□ 1.14
TMEM129A0AVI4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TMEM129A0AVI4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.2■■□□□ 1.14
TMEM129A0AVI4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.19■■□□□ 1.14
TMEM129A0AVI4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.19■■□□□ 1.14
TMEM129A0AVI4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM129A0AVI4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.19■■□□□ 1.14
TMEM129A0AVI4 MIR3648-2-201ENST00000581792 180 ntBASIC22.19■■□□□ 1.14
TMEM129A0AVI4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.19■■□□□ 1.14
TMEM129A0AVI4 MIR3648-1-201ENST00000615959 180 ntBASIC22.19■■□□□ 1.14
TMEM129A0AVI4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
TMEM129A0AVI4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.19■■□□□ 1.14
TMEM129A0AVI4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM129A0AVI4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM129A0AVI4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TMEM129A0AVI4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM129A0AVI4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.18■■□□□ 1.14
TMEM129A0AVI4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.18■■□□□ 1.14
TMEM129A0AVI4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.18■■□□□ 1.14
TMEM129A0AVI4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.18■■□□□ 1.14
TMEM129A0AVI4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.18■■□□□ 1.14
TMEM129A0AVI4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.17■■□□□ 1.14
TMEM129A0AVI4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM129A0AVI4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM129A0AVI4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.17■■□□□ 1.14
TMEM129A0AVI4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM129A0AVI4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM129A0AVI4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM129A0AVI4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM129A0AVI4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM129A0AVI4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM129A0AVI4 AP004609.3-201ENST00000610705 1884 ntBASIC22.16■■□□□ 1.14
TMEM129A0AVI4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM129A0AVI4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
TMEM129A0AVI4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM129A0AVI4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM129A0AVI4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM129A0AVI4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM129A0AVI4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.15■■□□□ 1.14
TMEM129A0AVI4 AC016575.1-201ENST00000607026 382 ntBASIC22.15■■□□□ 1.14
TMEM129A0AVI4 CR559946.2-201ENST00000623684 991 ntBASIC22.15■■□□□ 1.14
TMEM129A0AVI4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM129A0AVI4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM129A0AVI4 WHAMMP2-203ENST00000563942 1603 ntBASIC22.15■■□□□ 1.14
TMEM129A0AVI4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM129A0AVI4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TMEM129A0AVI4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.14■■□□□ 1.14
TMEM129A0AVI4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TMEM129A0AVI4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TMEM129A0AVI4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms