Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
A0A1W2PRF3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
A0A1W2PRF3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
A0A1W2PRF3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
A0A1W2PRF3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.26■□□□□ 0.83
A0A1W2PRF3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
A0A1W2PRF3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.26■□□□□ 0.83
A0A1W2PRF3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.26■□□□□ 0.83
A0A1W2PRF3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
A0A1W2PRF3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.25■□□□□ 0.83
A0A1W2PRF3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.25■□□□□ 0.83
A0A1W2PRF3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
A0A1W2PRF3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
A0A1W2PRF3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.25■□□□□ 0.83
A0A1W2PRF3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
A0A1W2PRF3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
A0A1W2PRF3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
A0A1W2PRF3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.24■□□□□ 0.83
A0A1W2PRF3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
A0A1W2PRF3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
A0A1W2PRF3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
A0A1W2PRF3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
A0A1W2PRF3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
A0A1W2PRF3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
A0A1W2PRF3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
A0A1W2PRF3 LINC01003-201ENST00000564834 1764 ntBASIC20.23■□□□□ 0.83
A0A1W2PRF3 AC142086.6-201ENST00000621154 1765 ntBASIC20.23■□□□□ 0.83
A0A1W2PRF3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
A0A1W2PRF3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
A0A1W2PRF3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.21■□□□□ 0.83
A0A1W2PRF3 AL157400.5-201ENST00000507624 621 ntBASIC20.21■□□□□ 0.83
A0A1W2PRF3 AC092296.2-201ENST00000589470 999 ntBASIC20.21■□□□□ 0.83
A0A1W2PRF3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
A0A1W2PRF3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.21■□□□□ 0.83
A0A1W2PRF3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.2■□□□□ 0.82
A0A1W2PRF3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
A0A1W2PRF3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
A0A1W2PRF3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
A0A1W2PRF3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
A0A1W2PRF3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A0A1W2PRF3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
A0A1W2PRF3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
A0A1W2PRF3 ABHD17AP5-201ENST00000580133 923 ntBASIC20.19■□□□□ 0.82
A0A1W2PRF3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A0A1W2PRF3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
A0A1W2PRF3 WHAMMP3-201ENST00000611636 1609 ntBASIC20.18■□□□□ 0.82
A0A1W2PRF3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
A0A1W2PRF3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.18■□□□□ 0.82
A0A1W2PRF3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.18■□□□□ 0.82
A0A1W2PRF3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.18■□□□□ 0.82
A0A1W2PRF3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
A0A1W2PRF3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
A0A1W2PRF3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A0A1W2PRF3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
A0A1W2PRF3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A0A1W2PRF3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
A0A1W2PRF3 ECEL1P2-201ENST00000461596 1295 ntBASIC20.17■□□□□ 0.82
A0A1W2PRF3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
A0A1W2PRF3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A0A1W2PRF3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
A0A1W2PRF3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
A0A1W2PRF3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
A0A1W2PRF3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
A0A1W2PRF3 BX255925.1-201ENST00000566954 1854 ntBASIC20.16■□□□□ 0.82
A0A1W2PRF3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
A0A1W2PRF3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
A0A1W2PRF3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
A0A1W2PRF3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
A0A1W2PRF3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
A0A1W2PRF3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
A0A1W2PRF3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.14■□□□□ 0.81
A0A1W2PRF3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
A0A1W2PRF3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
A0A1W2PRF3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
A0A1W2PRF3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.13■□□□□ 0.81
A0A1W2PRF3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.13■□□□□ 0.81
A0A1W2PRF3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
A0A1W2PRF3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.13■□□□□ 0.81
A0A1W2PRF3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.12■□□□□ 0.81
A0A1W2PRF3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
A0A1W2PRF3 SMPD5-203ENST00000639008 1464 ntBASIC20.12■□□□□ 0.81
A0A1W2PRF3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
A0A1W2PRF3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.12■□□□□ 0.81
A0A1W2PRF3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
A0A1W2PRF3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.11■□□□□ 0.81
A0A1W2PRF3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
A0A1W2PRF3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
A0A1W2PRF3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
A0A1W2PRF3 AL449106.1-201ENST00000608517 1980 ntBASIC20.1■□□□□ 0.81
A0A1W2PRF3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
A0A1W2PRF3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
A0A1W2PRF3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
A0A1W2PRF3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
A0A1W2PRF3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
A0A1W2PRF3 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.09■□□□□ 0.81
A0A1W2PRF3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
A0A1W2PRF3 U85056.1-201ENST00000616429 682 ntBASIC20.09■□□□□ 0.81
A0A1W2PRF3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
A0A1W2PRF3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
A0A1W2PRF3 AL359504.2-201ENST00000605506 1601 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms