Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 AC074183.2-201ENST00000623112 922 ntBASIC22.24■■□□□ 1.15
TRGV8A0A0C4DH27 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.24■■□□□ 1.15
TRGV8A0A0C4DH27 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRGV8A0A0C4DH27 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRGV8A0A0C4DH27 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.23■■□□□ 1.15
TRGV8A0A0C4DH27 MIR3960-201ENST00000583311 91 ntBASIC22.23■■□□□ 1.15
TRGV8A0A0C4DH27 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.22■■□□□ 1.15
TRGV8A0A0C4DH27 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TRGV8A0A0C4DH27 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.22■■□□□ 1.15
TRGV8A0A0C4DH27 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
TRGV8A0A0C4DH27 RAP2CP1-202ENST00000605179 643 ntBASIC22.22■■□□□ 1.15
TRGV8A0A0C4DH27 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRGV8A0A0C4DH27 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.21■■□□□ 1.15
TRGV8A0A0C4DH27 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRGV8A0A0C4DH27 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.21■■□□□ 1.15
TRGV8A0A0C4DH27 SPCS2P3-201ENST00000500401 656 ntBASIC22.21■■□□□ 1.15
TRGV8A0A0C4DH27 MIR6765-201ENST00000614092 87 ntBASIC22.21■■□□□ 1.15
TRGV8A0A0C4DH27 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRGV8A0A0C4DH27 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.21■■□□□ 1.15
TRGV8A0A0C4DH27 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRGV8A0A0C4DH27 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRGV8A0A0C4DH27 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRGV8A0A0C4DH27 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRGV8A0A0C4DH27 YBX1P4-201ENST00000392794 808 ntBASIC22.2■■□□□ 1.14
TRGV8A0A0C4DH27 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.2■■□□□ 1.14
TRGV8A0A0C4DH27 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRGV8A0A0C4DH27 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TRGV8A0A0C4DH27 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
TRGV8A0A0C4DH27 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.19■■□□□ 1.14
TRGV8A0A0C4DH27 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.19■■□□□ 1.14
TRGV8A0A0C4DH27 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRGV8A0A0C4DH27 AC018755.3-202ENST00000596210 929 ntBASIC22.19■■□□□ 1.14
TRGV8A0A0C4DH27 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRGV8A0A0C4DH27 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRGV8A0A0C4DH27 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRGV8A0A0C4DH27 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
TRGV8A0A0C4DH27 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRGV8A0A0C4DH27 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.18■■□□□ 1.14
TRGV8A0A0C4DH27 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
TRGV8A0A0C4DH27 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRGV8A0A0C4DH27 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TRGV8A0A0C4DH27 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.17■■□□□ 1.14
TRGV8A0A0C4DH27 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRGV8A0A0C4DH27 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRGV8A0A0C4DH27 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TRGV8A0A0C4DH27 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.17■■□□□ 1.14
TRGV8A0A0C4DH27 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.17■■□□□ 1.14
TRGV8A0A0C4DH27 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
TRGV8A0A0C4DH27 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.16■■□□□ 1.14
TRGV8A0A0C4DH27 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRGV8A0A0C4DH27 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.16■■□□□ 1.14
TRGV8A0A0C4DH27 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.16■■□□□ 1.14
TRGV8A0A0C4DH27 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRGV8A0A0C4DH27 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRGV8A0A0C4DH27 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.15■■□□□ 1.14
TRGV8A0A0C4DH27 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRGV8A0A0C4DH27 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRGV8A0A0C4DH27 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRGV8A0A0C4DH27 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRGV8A0A0C4DH27 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.14■■□□□ 1.13
TRGV8A0A0C4DH27 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRGV8A0A0C4DH27 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.14■■□□□ 1.13
TRGV8A0A0C4DH27 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRGV8A0A0C4DH27 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
TRGV8A0A0C4DH27 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRGV8A0A0C4DH27 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRGV8A0A0C4DH27 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRGV8A0A0C4DH27 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRGV8A0A0C4DH27 AC009299.2-201ENST00000482477 511 ntBASIC22.13■■□□□ 1.13
TRGV8A0A0C4DH27 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.13■■□□□ 1.13
TRGV8A0A0C4DH27 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRGV8A0A0C4DH27 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRGV8A0A0C4DH27 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRGV8A0A0C4DH27 ABCB10P3-201ENST00000561950 2166 ntBASIC22.12■■□□□ 1.13
TRGV8A0A0C4DH27 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRGV8A0A0C4DH27 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
TRGV8A0A0C4DH27 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
TRGV8A0A0C4DH27 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.12■■□□□ 1.13
TRGV8A0A0C4DH27 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.11■■□□□ 1.13
TRGV8A0A0C4DH27 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRGV8A0A0C4DH27 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRGV8A0A0C4DH27 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.1■■□□□ 1.13
TRGV8A0A0C4DH27 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.1■■□□□ 1.13
TRGV8A0A0C4DH27 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
TRGV8A0A0C4DH27 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.1■■□□□ 1.13
TRGV8A0A0C4DH27 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRGV8A0A0C4DH27 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRGV8A0A0C4DH27 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRGV8A0A0C4DH27 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRGV8A0A0C4DH27 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRGV8A0A0C4DH27 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRGV8A0A0C4DH27 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
TRGV8A0A0C4DH27 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.09■■□□□ 1.13
TRGV8A0A0C4DH27 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRGV8A0A0C4DH27 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRGV8A0A0C4DH27 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
TRGV8A0A0C4DH27 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.08■■□□□ 1.13
TRGV8A0A0C4DH27 AC103834.1-201ENST00000520383 144 ntBASIC22.08■■□□□ 1.13
TRGV8A0A0C4DH27 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRGV8A0A0C4DH27 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 280.3 ms