Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV5A0A0B4J249 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV5A0A0B4J249 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAV5A0A0B4J249 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV5A0A0B4J249 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV5A0A0B4J249 DUX4L28-201ENST00000623687 678 ntBASIC19.11■□□□□ 0.65
TRAV5A0A0B4J249 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV5A0A0B4J249 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV5A0A0B4J249 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV5A0A0B4J249 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRAV5A0A0B4J249 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV5A0A0B4J249 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAV5A0A0B4J249 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV5A0A0B4J249 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRAV5A0A0B4J249 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV5A0A0B4J249 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV5A0A0B4J249 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.09■□□□□ 0.65
TRAV5A0A0B4J249 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV5A0A0B4J249 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV5A0A0B4J249 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV5A0A0B4J249 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.08■□□□□ 0.65
TRAV5A0A0B4J249 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
TRAV5A0A0B4J249 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TRAV5A0A0B4J249 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV5A0A0B4J249 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV5A0A0B4J249 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV5A0A0B4J249 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV5A0A0B4J249 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV5A0A0B4J249 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV5A0A0B4J249 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV5A0A0B4J249 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.06■□□□□ 0.64
TRAV5A0A0B4J249 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV5A0A0B4J249 AC142472.1-201ENST00000612013 1741 ntBASIC19.06■□□□□ 0.64
TRAV5A0A0B4J249 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV5A0A0B4J249 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAV5A0A0B4J249 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV5A0A0B4J249 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV5A0A0B4J249 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV5A0A0B4J249 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV5A0A0B4J249 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV5A0A0B4J249 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV5A0A0B4J249 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV5A0A0B4J249 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV5A0A0B4J249 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV5A0A0B4J249 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV5A0A0B4J249 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV5A0A0B4J249 AC110285.7-201ENST00000624417 1536 ntBASIC19.04■□□□□ 0.64
TRAV5A0A0B4J249 AC093323.1-202ENST00000635031 2045 ntBASIC19.03■□□□□ 0.64
TRAV5A0A0B4J249 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV5A0A0B4J249 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV5A0A0B4J249 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV5A0A0B4J249 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV5A0A0B4J249 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV5A0A0B4J249 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV5A0A0B4J249 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV5A0A0B4J249 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV5A0A0B4J249 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV5A0A0B4J249 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV5A0A0B4J249 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV5A0A0B4J249 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV5A0A0B4J249 WHAMMP3-201ENST00000611636 1609 ntBASIC19.01■□□□□ 0.63
TRAV5A0A0B4J249 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV5A0A0B4J249 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.01■□□□□ 0.63
TRAV5A0A0B4J249 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV5A0A0B4J249 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRAV5A0A0B4J249 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV5A0A0B4J249 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV5A0A0B4J249 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV5A0A0B4J249 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19■□□□□ 0.63
TRAV5A0A0B4J249 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV5A0A0B4J249 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV5A0A0B4J249 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV5A0A0B4J249 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV5A0A0B4J249 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV5A0A0B4J249 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV5A0A0B4J249 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
TRAV5A0A0B4J249 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV5A0A0B4J249 MIR3665-201ENST00000578708 105 ntBASIC18.98■□□□□ 0.63
TRAV5A0A0B4J249 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV5A0A0B4J249 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAV5A0A0B4J249 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.97■□□□□ 0.63
TRAV5A0A0B4J249 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV5A0A0B4J249 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV5A0A0B4J249 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV5A0A0B4J249 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV5A0A0B4J249 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV5A0A0B4J249 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV5A0A0B4J249 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV5A0A0B4J249 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV5A0A0B4J249 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms