Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 AC004870.1-201ENST00000315132 882 ntBASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 MINOS1P3-201ENST00000457048 203 ntBASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 AC068472.1-201ENST00000474589 881 ntBASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 GUSBP12-201ENST00000513727 720 ntBASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 FICD-205ENST00000552758 603 ntTSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 BMF-207ENST00000559701 630 ntTSL 3 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 ABR-217ENST00000572441 563 ntTSL 4 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 AC011840.4-201ENST00000578471 627 ntBASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 SLC25A6P4-201ENST00000586535 553 ntBASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 AL353801.3-201ENST00000609898 542 ntBASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 PHGDH-209ENST00000641074 1780 ntBASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 AC100803.2-201ENST00000562459 1963 ntBASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
KRTAP4-3Q9BYR4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 AL020996.1-203ENST00000536896 2307 ntBASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 AP000593.1-201ENST00000393668 712 ntBASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
KRTAP4-3Q9BYR4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms