Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC112777.1-201ENST00000540175 1423 ntBASIC12.63□□□□□ -0.39
UPK3BQ9BT76 KRT8P50-201ENST00000562022 1438 ntBASIC12.63□□□□□ -0.39
UPK3BQ9BT76 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 AC008687.5-201ENST00000593746 558 ntBASIC12.63□□□□□ -0.39
UPK3BQ9BT76 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK3BQ9BT76 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 AL162741.1-201ENST00000565563 1558 ntBASIC12.62□□□□□ -0.39
UPK3BQ9BT76 KRT89P-201ENST00000620027 1478 ntBASIC12.62□□□□□ -0.39
UPK3BQ9BT76 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 CROCCP1-201ENST00000426910 5675 ntBASIC12.62□□□□□ -0.39
UPK3BQ9BT76 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UPK3BQ9BT76 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms