Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
ODF3Q96PU9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.4□□□□□ -0.27
ODF3Q96PU9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
ODF3Q96PU9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.4□□□□□ -0.27
ODF3Q96PU9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 INGX-201ENST00000359239 846 ntBASIC13.39□□□□□ -0.27
ODF3Q96PU9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 KRT89P-201ENST00000620027 1478 ntBASIC13.39□□□□□ -0.27
ODF3Q96PU9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF3Q96PU9 KRT8P9-201ENST00000558927 1449 ntBASIC13.39□□□□□ -0.27
ODF3Q96PU9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ODF3Q96PU9 KRT18P22-201ENST00000402024 1347 ntBASIC13.39□□□□□ -0.27
ODF3Q96PU9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 LINC00896-202ENST00000609602 2128 ntBASIC13.38□□□□□ -0.27
ODF3Q96PU9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.38□□□□□ -0.27
ODF3Q96PU9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF3Q96PU9 AC067852.2-201ENST00000590513 2313 ntBASIC13.38□□□□□ -0.27
ODF3Q96PU9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ODF3Q96PU9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms