Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 AC134043.2-201ENST00000624206 2238 ntBASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 AC063952.2-201ENST00000498792 1227 ntBASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 LINC01238-205ENST00000567549 1107 ntBASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 AC026471.1-201ENST00000564629 3026 ntBASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 KRT18P38-201ENST00000449496 1282 ntBASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 AC092597.1-201ENST00000487352 616 ntBASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 AL136038.4-201ENST00000603606 1261 ntBASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDH19Q8TAB3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDH19Q8TAB3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
PCDH19Q8TAB3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 RNF152P1-201ENST00000397754 604 ntBASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 TSPY5P-201ENST00000426936 936 ntBASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 HLA-F-220ENST00000434407 884 ntBASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 DUTP2-201ENST00000519164 463 ntBASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH19Q8TAB3 KRT18P55-202ENST00000578578 1546 ntBASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms