Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf42Q8N5U0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 MIR149-201ENST00000384879 89 ntBASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf42Q8N5U0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 PVRIG2P-201ENST00000435460 978 ntBASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 AC112907.2-201ENST00000448639 330 ntBASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 AC092597.1-201ENST00000487352 616 ntBASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 NTF6B-201ENST00000591913 560 ntBASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 AC010331.1-201ENST00000611423 582 ntBASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 AL590326.2-201ENST00000625139 305 ntBASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf42Q8N5U0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
C11orf42Q8N5U0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
C11orf42Q8N5U0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
C11orf42Q8N5U0 AC009102.3-201ENST00000623118 1491 ntBASIC15.08■□□□□ 0.01
C11orf42Q8N5U0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
C11orf42Q8N5U0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
C11orf42Q8N5U0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.08■□□□□ 0.01
C11orf42Q8N5U0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
C11orf42Q8N5U0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C11orf42Q8N5U0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
C11orf42Q8N5U0 HBZP1-201ENST00000354915 429 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms