Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 AC012615.1-201ENST00000565797 1299 ntBASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 NUS1P1-201ENST00000446295 882 ntBASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ARHGEF39Q8N4T4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 AP000867.3-201ENST00000524675 377 ntBASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 AC011840.4-201ENST00000578471 627 ntBASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 Z69720.1-201ENST00000601483 472 ntBASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 AC012313.10-201ENST00000623509 926 ntBASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARHGEF39Q8N4T4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 AL354751.1-201ENST00000412768 1863 ntBASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms