Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 LAGE3P1-201ENST00000425356 484 ntBASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A3Q8N4M1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 AC112698.1-201ENST00000510299 916 ntBASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC44A3Q8N4M1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 LINC01126-201ENST00000623515 1646 ntBASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 AC007952.6-201ENST00000573168 2673 ntBASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 AC003957.1-201ENST00000625108 2673 ntBASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC44A3Q8N4M1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 AC211486.1-202ENST00000416371 468 ntBASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 AC211476.1-201ENST00000503899 468 ntBASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A3Q8N4M1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC44A3Q8N4M1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms