Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTTNQ86VV8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTTNQ86VV8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.02■□□□□ 0.16
RTTNQ86VV8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.02■□□□□ 0.16
RTTNQ86VV8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTTNQ86VV8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RTTNQ86VV8 AC083906.6-201ENST00000641366 219 ntBASIC16.02■□□□□ 0.16
RTTNQ86VV8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.02■□□□□ 0.16
RTTNQ86VV8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTTNQ86VV8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RTTNQ86VV8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.02■□□□□ 0.16
RTTNQ86VV8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 MYLKP1-201ENST00000509077 1580 ntBASIC16.02■□□□□ 0.15
RTTNQ86VV8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 HBZP1-201ENST00000354915 429 ntBASIC16.02■□□□□ 0.15
RTTNQ86VV8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 AL512604.3-201ENST00000569583 964 ntBASIC16.02■□□□□ 0.15
RTTNQ86VV8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 AC012313.10-201ENST00000623509 926 ntBASIC16.02■□□□□ 0.15
RTTNQ86VV8 AL121956.5-201ENST00000625261 221 ntBASIC16.02■□□□□ 0.15
RTTNQ86VV8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTTNQ86VV8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.02■□□□□ 0.15
RTTNQ86VV8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RTTNQ86VV8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.01■□□□□ 0.15
RTTNQ86VV8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.01■□□□□ 0.15
RTTNQ86VV8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.01■□□□□ 0.15
RTTNQ86VV8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
RTTNQ86VV8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 STARP1-201ENST00000397973 869 ntBASIC16.01■□□□□ 0.15
RTTNQ86VV8 FAM86EP-206ENST00000510506 987 ntBASIC16.01■□□□□ 0.15
RTTNQ86VV8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
RTTNQ86VV8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.01■□□□□ 0.15
RTTNQ86VV8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.01■□□□□ 0.15
RTTNQ86VV8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 AC093677.2-201ENST00000600169 1863 ntBASIC16.01■□□□□ 0.15
RTTNQ86VV8 KRT8P7-201ENST00000533003 1432 ntBASIC16.01■□□□□ 0.15
RTTNQ86VV8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.01■□□□□ 0.15
RTTNQ86VV8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTTNQ86VV8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16■□□□□ 0.15
RTTNQ86VV8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16■□□□□ 0.15
RTTNQ86VV8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16■□□□□ 0.15
RTTNQ86VV8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16■□□□□ 0.15
RTTNQ86VV8 AC012313.1-201ENST00000593393 3059 ntBASIC16■□□□□ 0.15
RTTNQ86VV8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16■□□□□ 0.15
RTTNQ86VV8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RTTNQ86VV8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16■□□□□ 0.15
RTTNQ86VV8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RTTNQ86VV8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16■□□□□ 0.15
RTTNQ86VV8 TSPY5P-201ENST00000426936 936 ntBASIC16■□□□□ 0.15
RTTNQ86VV8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16■□□□□ 0.15
RTTNQ86VV8 AC092647.4-201ENST00000457211 535 ntBASIC16■□□□□ 0.15
RTTNQ86VV8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16■□□□□ 0.15
RTTNQ86VV8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16■□□□□ 0.15
RTTNQ86VV8 AL157888.1-201ENST00000631930 593 ntBASIC16■□□□□ 0.15
RTTNQ86VV8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms