Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL359736.2-201ENST00000621992 437 ntBASIC16.41■□□□□ 0.22
SHFQ7M4L6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHFQ7M4L6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SHFQ7M4L6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.4■□□□□ 0.22
SHFQ7M4L6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 DGCR10-201ENST00000609839 495 ntBASIC16.4■□□□□ 0.22
SHFQ7M4L6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHFQ7M4L6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHFQ7M4L6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SHFQ7M4L6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SHFQ7M4L6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SHFQ7M4L6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SHFQ7M4L6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
SHFQ7M4L6 AC096733.2-201ENST00000609937 1394 ntBASIC16.39■□□□□ 0.21
SHFQ7M4L6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 KRT8P50-201ENST00000562022 1438 ntBASIC16.39■□□□□ 0.21
SHFQ7M4L6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 MIR564-202ENST00000385049 94 ntBASIC16.39■□□□□ 0.21
SHFQ7M4L6 FAM197Y1-201ENST00000421178 764 ntBASIC16.39■□□□□ 0.21
SHFQ7M4L6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 CD177P1-201ENST00000606252 935 ntBASIC16.39■□□□□ 0.21
SHFQ7M4L6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms