Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ESPNP-201ENST00000270691 2015 ntBASIC13.5□□□□□ -0.25
CMC4P56277 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CMC4P56277 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CMC4P56277 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMC4P56277 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.49□□□□□ -0.25
CMC4P56277 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.49□□□□□ -0.25
CMC4P56277 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.49□□□□□ -0.25
CMC4P56277 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.49□□□□□ -0.25
CMC4P56277 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CMC4P56277 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CMC4P56277 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.49□□□□□ -0.25
CMC4P56277 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CMC4P56277 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.49□□□□□ -0.25
CMC4P56277 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.49□□□□□ -0.25
CMC4P56277 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.49□□□□□ -0.25
CMC4P56277 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CMC4P56277 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CMC4P56277 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CMC4P56277 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.49□□□□□ -0.25
CMC4P56277 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CMC4P56277 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.49□□□□□ -0.25
CMC4P56277 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CMC4P56277 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CMC4P56277 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
CMC4P56277 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.49□□□□□ -0.25
CMC4P56277 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMC4P56277 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.48□□□□□ -0.25
CMC4P56277 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.48□□□□□ -0.25
CMC4P56277 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.48□□□□□ -0.25
CMC4P56277 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.48□□□□□ -0.25
CMC4P56277 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.48□□□□□ -0.25
CMC4P56277 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 CHCHD2P8-201ENST00000429873 447 ntBASIC13.48□□□□□ -0.25
CMC4P56277 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.48□□□□□ -0.25
CMC4P56277 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.48□□□□□ -0.25
CMC4P56277 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.48□□□□□ -0.25
CMC4P56277 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.48□□□□□ -0.25
CMC4P56277 AC069148.1-201ENST00000608741 768 ntBASIC13.48□□□□□ -0.25
CMC4P56277 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.48□□□□□ -0.25
CMC4P56277 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.48□□□□□ -0.25
CMC4P56277 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CMC4P56277 LINC01126-201ENST00000623515 1646 ntBASIC13.48□□□□□ -0.25
CMC4P56277 Z83836.1-201ENST00000624605 1642 ntBASIC13.48□□□□□ -0.25
CMC4P56277 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CMC4P56277 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
CMC4P56277 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.48□□□□□ -0.25
CMC4P56277 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CMC4P56277 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.48□□□□□ -0.25
CMC4P56277 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms