Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCK1P35558 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCK1P35558 AL096828.2-201ENST00000567259 1965 ntBASIC19.1■□□□□ 0.65
PCK1P35558 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCK1P35558 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCK1P35558 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCK1P35558 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCK1P35558 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.09■□□□□ 0.65
PCK1P35558 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCK1P35558 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.09■□□□□ 0.65
PCK1P35558 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCK1P35558 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.09■□□□□ 0.65
PCK1P35558 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCK1P35558 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCK1P35558 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.09■□□□□ 0.65
PCK1P35558 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCK1P35558 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.09■□□□□ 0.65
PCK1P35558 MIR3917-201ENST00000580971 93 ntBASIC19.09■□□□□ 0.65
PCK1P35558 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.09■□□□□ 0.65
PCK1P35558 AC097493.4-201ENST00000641197 219 ntBASIC19.09■□□□□ 0.65
PCK1P35558 AC092865.7-201ENST00000641832 219 ntBASIC19.09■□□□□ 0.65
PCK1P35558 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.09■□□□□ 0.65
PCK1P35558 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.09■□□□□ 0.65
PCK1P35558 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.09■□□□□ 0.65
PCK1P35558 AL024508.2-201ENST00000607749 1894 ntBASIC19.09■□□□□ 0.65
PCK1P35558 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCK1P35558 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCK1P35558 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCK1P35558 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
PCK1P35558 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PCK1P35558 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.08■□□□□ 0.65
PCK1P35558 NOC2LP2-201ENST00000407594 1944 ntBASIC19.08■□□□□ 0.65
PCK1P35558 LINC01126-201ENST00000623515 1646 ntBASIC19.08■□□□□ 0.65
PCK1P35558 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCK1P35558 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCK1P35558 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCK1P35558 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.08■□□□□ 0.64
PCK1P35558 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PCK1P35558 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
PCK1P35558 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.08■□□□□ 0.64
PCK1P35558 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.08■□□□□ 0.64
PCK1P35558 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.08■□□□□ 0.64
PCK1P35558 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.08■□□□□ 0.64
PCK1P35558 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.08■□□□□ 0.64
PCK1P35558 REXO1L9P-201ENST00000604264 2108 ntBASIC19.08■□□□□ 0.64
PCK1P35558 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PCK1P35558 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCK1P35558 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.08■□□□□ 0.64
PCK1P35558 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCK1P35558 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCK1P35558 AC138028.4-201ENST00000564984 1845 ntBASIC19.08■□□□□ 0.64
PCK1P35558 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCK1P35558 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCK1P35558 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCK1P35558 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.08■□□□□ 0.64
PCK1P35558 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCK1P35558 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.07■□□□□ 0.64
PCK1P35558 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.07■□□□□ 0.64
PCK1P35558 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCK1P35558 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.07■□□□□ 0.64
PCK1P35558 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
PCK1P35558 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.07■□□□□ 0.64
PCK1P35558 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.07■□□□□ 0.64
PCK1P35558 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.07■□□□□ 0.64
PCK1P35558 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.07■□□□□ 0.64
PCK1P35558 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.07■□□□□ 0.64
PCK1P35558 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.07■□□□□ 0.64
PCK1P35558 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCK1P35558 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCK1P35558 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCK1P35558 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCK1P35558 FLJ13224-201ENST00000313737 1514 ntBASIC19.06■□□□□ 0.64
PCK1P35558 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCK1P35558 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCK1P35558 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms