Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.11□□□□□ -0.15
RAB5AP20339 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB5AP20339 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB5AP20339 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB5AP20339 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB5AP20339 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB5AP20339 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB5AP20339 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAB5AP20339 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB5AP20339 TSPY26P-201ENST00000476365 1326 ntBASIC14.11□□□□□ -0.15
RAB5AP20339 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RAB5AP20339 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB5AP20339 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB5AP20339 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB5AP20339 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAB5AP20339 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB5AP20339 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RAB5AP20339 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RAB5AP20339 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RAB5AP20339 AL138688.1-201ENST00000624851 1594 ntBASIC14.1□□□□□ -0.15
RAB5AP20339 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB5AP20339 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RAB5AP20339 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB5AP20339 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.1□□□□□ -0.15
RAB5AP20339 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RAB5AP20339 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.1□□□□□ -0.15
RAB5AP20339 MIR4466-201ENST00000606121 54 ntBASIC14.1□□□□□ -0.15
RAB5AP20339 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB5AP20339 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RAB5AP20339 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB5AP20339 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB5AP20339 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB5AP20339 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB5AP20339 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RAB5AP20339 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB5AP20339 AL096828.2-201ENST00000567259 1965 ntBASIC14.09□□□□□ -0.15
RAB5AP20339 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5AP20339 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5AP20339 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB5AP20339 DBET-201ENST00000630918 3363 ntBASIC14.09□□□□□ -0.15
RAB5AP20339 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
RAB5AP20339 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 YBX1P1-201ENST00000445822 960 ntBASIC14.09□□□□□ -0.15
RAB5AP20339 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.09□□□□□ -0.15
RAB5AP20339 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.09□□□□□ -0.15
RAB5AP20339 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB5AP20339 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5AP20339 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5AP20339 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5AP20339 AL358852.1-201ENST00000623174 1268 ntBASIC14.09□□□□□ -0.15
RAB5AP20339 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB5AP20339 AC006449.5-201ENST00000610658 2098 ntBASIC14.09□□□□□ -0.15
RAB5AP20339 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB5AP20339 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RAB5AP20339 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAB5AP20339 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB5AP20339 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RAB5AP20339 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms