Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.29□□□□□ -0.12
TRGV3P03979 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRGV3P03979 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRGV3P03979 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV3P03979 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRGV3P03979 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRGV3P03979 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV3P03979 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRGV3P03979 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.28□□□□□ -0.12
TRGV3P03979 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.28□□□□□ -0.12
TRGV3P03979 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRGV3P03979 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV3P03979 LINC01311-201ENST00000565162 1445 ntBASIC14.28□□□□□ -0.12
TRGV3P03979 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV3P03979 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.28□□□□□ -0.12
TRGV3P03979 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
TRGV3P03979 AC008687.5-201ENST00000593746 558 ntBASIC14.28□□□□□ -0.12
TRGV3P03979 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV3P03979 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV3P03979 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.28□□□□□ -0.12
TRGV3P03979 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRGV3P03979 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.28□□□□□ -0.12
TRGV3P03979 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV3P03979 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV3P03979 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV3P03979 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV3P03979 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV3P03979 AL391807.1-203ENST00000604392 2365 ntBASIC14.27□□□□□ -0.12
TRGV3P03979 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.27□□□□□ -0.12
TRGV3P03979 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV3P03979 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.27□□□□□ -0.12
TRGV3P03979 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.27□□□□□ -0.12
TRGV3P03979 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV3P03979 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV3P03979 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV3P03979 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV3P03979 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV3P03979 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRGV3P03979 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRGV3P03979 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
TRGV3P03979 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV3P03979 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV3P03979 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV3P03979 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV3P03979 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV3P03979 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.27□□□□□ -0.13
TRGV3P03979 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV3P03979 AL671277.2-201ENST00000458060 996 ntBASIC14.27□□□□□ -0.13
TRGV3P03979 AC092597.1-201ENST00000487352 616 ntBASIC14.27□□□□□ -0.13
TRGV3P03979 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.27□□□□□ -0.13
TRGV3P03979 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TRGV3P03979 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.27□□□□□ -0.13
TRGV3P03979 NTF6B-201ENST00000591913 560 ntBASIC14.27□□□□□ -0.13
TRGV3P03979 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.27□□□□□ -0.13
TRGV3P03979 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
TRGV3P03979 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.27□□□□□ -0.13
TRGV3P03979 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV3P03979 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV3P03979 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV3P03979 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV3P03979 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.27□□□□□ -0.13
TRGV3P03979 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV3P03979 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRGV3P03979 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV3P03979 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRGV3P03979 ESPNP-201ENST00000270691 2015 ntBASIC14.27□□□□□ -0.13
TRGV3P03979 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV3P03979 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV3P03979 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV3P03979 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV3P03979 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.26□□□□□ -0.13
TRGV3P03979 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms