Protein–RNA interactions for Protein: O95704

APBB3, Amyloid-beta A4 precursor protein-binding family B member 3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3O95704 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APBB3O95704 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
APBB3O95704 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.1■□□□□ 0.49
APBB3O95704 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.1■□□□□ 0.49
APBB3O95704 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
APBB3O95704 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
APBB3O95704 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
APBB3O95704 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
APBB3O95704 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.1■□□□□ 0.49
APBB3O95704 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.1■□□□□ 0.49
APBB3O95704 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.1■□□□□ 0.49
APBB3O95704 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 AC025062.2-201ENST00000605477 670 ntBASIC18.1■□□□□ 0.49
APBB3O95704 AC008735.5-201ENST00000623544 497 ntBASIC18.1■□□□□ 0.49
APBB3O95704 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
APBB3O95704 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
APBB3O95704 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
APBB3O95704 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.09■□□□□ 0.49
APBB3O95704 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.09■□□□□ 0.49
APBB3O95704 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.09■□□□□ 0.49
APBB3O95704 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.09■□□□□ 0.49
APBB3O95704 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.09■□□□□ 0.49
APBB3O95704 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
APBB3O95704 UPF3AP3-201ENST00000420996 769 ntBASIC18.09■□□□□ 0.49
APBB3O95704 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.09■□□□□ 0.49
APBB3O95704 KRT18P3-201ENST00000451602 1288 ntBASIC18.09■□□□□ 0.49
APBB3O95704 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
APBB3O95704 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
APBB3O95704 RNA5SP415-201ENST00000517246 115 ntBASIC18.09■□□□□ 0.49
APBB3O95704 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.09■□□□□ 0.49
APBB3O95704 AC012640.2-201ENST00000561606 901 ntBASIC18.09■□□□□ 0.49
APBB3O95704 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
APBB3O95704 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
APBB3O95704 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.09■□□□□ 0.49
APBB3O95704 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APBB3O95704 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.09■□□□□ 0.49
APBB3O95704 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.08■□□□□ 0.49
APBB3O95704 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
APBB3O95704 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
APBB3O95704 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
APBB3O95704 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
APBB3O95704 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.08■□□□□ 0.49
APBB3O95704 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
APBB3O95704 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.08■□□□□ 0.49
APBB3O95704 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
APBB3O95704 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
APBB3O95704 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.08■□□□□ 0.48
APBB3O95704 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.08■□□□□ 0.48
APBB3O95704 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.08■□□□□ 0.48
APBB3O95704 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.08■□□□□ 0.48
APBB3O95704 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.08■□□□□ 0.48
APBB3O95704 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.08■□□□□ 0.48
APBB3O95704 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.08■□□□□ 0.48
APBB3O95704 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.08■□□□□ 0.48
APBB3O95704 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.08■□□□□ 0.48
APBB3O95704 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.08■□□□□ 0.48
APBB3O95704 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APBB3O95704 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
APBB3O95704 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.08■□□□□ 0.48
APBB3O95704 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APBB3O95704 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
APBB3O95704 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.07■□□□□ 0.48
APBB3O95704 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APBB3O95704 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APBB3O95704 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APBB3O95704 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.07■□□□□ 0.48
APBB3O95704 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APBB3O95704 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
APBB3O95704 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APBB3O95704 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APBB3O95704 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.07■□□□□ 0.48
APBB3O95704 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APBB3O95704 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.07■□□□□ 0.48
APBB3O95704 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms