Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BEST1O76090 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BEST1O76090 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
BEST1O76090 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.99■□□□□ 0.63
BEST1O76090 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.99■□□□□ 0.63
BEST1O76090 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.99■□□□□ 0.63
BEST1O76090 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.99■□□□□ 0.63
BEST1O76090 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
BEST1O76090 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.99■□□□□ 0.63
BEST1O76090 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.99■□□□□ 0.63
BEST1O76090 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 KRT17P6-201ENST00000453795 1220 ntBASIC18.99■□□□□ 0.63
BEST1O76090 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.99■□□□□ 0.63
BEST1O76090 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
BEST1O76090 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.99■□□□□ 0.63
BEST1O76090 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BEST1O76090 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.98■□□□□ 0.63
BEST1O76090 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.98■□□□□ 0.63
BEST1O76090 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.98■□□□□ 0.63
BEST1O76090 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
BEST1O76090 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
BEST1O76090 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.98■□□□□ 0.63
BEST1O76090 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.98■□□□□ 0.63
BEST1O76090 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.98■□□□□ 0.63
BEST1O76090 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.98■□□□□ 0.63
BEST1O76090 AC012615.1-201ENST00000565797 1299 ntBASIC18.98■□□□□ 0.63
BEST1O76090 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.98■□□□□ 0.63
BEST1O76090 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.98■□□□□ 0.63
BEST1O76090 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
BEST1O76090 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BEST1O76090 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
BEST1O76090 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 AP000997.3-201ENST00000623333 2250 ntBASIC18.98■□□□□ 0.63
BEST1O76090 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.98■□□□□ 0.63
BEST1O76090 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.98■□□□□ 0.63
BEST1O76090 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BEST1O76090 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
BEST1O76090 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
BEST1O76090 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BEST1O76090 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.97■□□□□ 0.63
BEST1O76090 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.97■□□□□ 0.63
BEST1O76090 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.97■□□□□ 0.63
BEST1O76090 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 AC246785.2-201ENST00000432512 513 ntBASIC18.97■□□□□ 0.63
BEST1O76090 AC112698.1-201ENST00000510299 916 ntBASIC18.97■□□□□ 0.63
BEST1O76090 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.97■□□□□ 0.63
BEST1O76090 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.97■□□□□ 0.63
BEST1O76090 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.97■□□□□ 0.63
BEST1O76090 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.97■□□□□ 0.63
BEST1O76090 Z69720.1-201ENST00000601483 472 ntBASIC18.97■□□□□ 0.63
BEST1O76090 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BEST1O76090 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms