Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.98■□□□□ 0.31
HCN1O60741 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.98■□□□□ 0.31
HCN1O60741 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.98■□□□□ 0.31
HCN1O60741 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HCN1O60741 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.97■□□□□ 0.31
HCN1O60741 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HCN1O60741 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HCN1O60741 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
HCN1O60741 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.97■□□□□ 0.31
HCN1O60741 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.97■□□□□ 0.31
HCN1O60741 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.97■□□□□ 0.31
HCN1O60741 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.97■□□□□ 0.31
HCN1O60741 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.97■□□□□ 0.31
HCN1O60741 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.97■□□□□ 0.31
HCN1O60741 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.97■□□□□ 0.31
HCN1O60741 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HCN1O60741 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HCN1O60741 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCN1O60741 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.97■□□□□ 0.31
HCN1O60741 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.97■□□□□ 0.31
HCN1O60741 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.96■□□□□ 0.31
HCN1O60741 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.96■□□□□ 0.31
HCN1O60741 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.96■□□□□ 0.31
HCN1O60741 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.96■□□□□ 0.31
HCN1O60741 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.96■□□□□ 0.31
HCN1O60741 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.96■□□□□ 0.31
HCN1O60741 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HCN1O60741 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HCN1O60741 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.96■□□□□ 0.31
HCN1O60741 AC034232.1-201ENST00000506026 1064 ntBASIC16.96■□□□□ 0.31
HCN1O60741 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HCN1O60741 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.96■□□□□ 0.31
HCN1O60741 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.96■□□□□ 0.31
HCN1O60741 AL358472.4-201ENST00000633140 710 ntBASIC16.96■□□□□ 0.31
HCN1O60741 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HCN1O60741 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
HCN1O60741 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCN1O60741 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCN1O60741 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCN1O60741 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCN1O60741 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
HCN1O60741 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
HCN1O60741 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.96■□□□□ 0.3
HCN1O60741 AC112777.1-201ENST00000540175 1423 ntBASIC16.96■□□□□ 0.3
HCN1O60741 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCN1O60741 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.95■□□□□ 0.3
HCN1O60741 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HCN1O60741 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HCN1O60741 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HCN1O60741 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.95■□□□□ 0.3
HCN1O60741 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.95■□□□□ 0.3
HCN1O60741 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HCN1O60741 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.95■□□□□ 0.3
HCN1O60741 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCN1O60741 AP000550.4-202ENST00000639755 178 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms