Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 PBX2P1-201ENST00000493219 1291 ntBASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 AC027682.1-201ENST00000562846 899 ntBASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.83■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 SNX18-202ENST00000343017 3140 ntBASIC15.83■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 AC126177.1-201ENST00000547829 2218 ntBASIC15.83■□□□□ 0.13
BOLA2-SMG1P6H3BVE0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 AC245052.3-201ENST00000450182 901 ntBASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 PHGDH-210ENST00000641115 1638 ntBASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 CYP2T1P-202ENST00000641596 2535 ntBASIC15.83■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 CICP14-201ENST00000629111 2732 ntBASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 AC092068.3-201ENST00000587894 2016 ntBASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 IGHV3-19-201ENST00000521488 291 ntBASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 AC008764.7-201ENST00000593779 1081 ntBASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 AC106739.1-201ENST00000617035 715 ntBASIC15.82■□□□□ 0.12
BOLA2-SMG1P6H3BVE0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms