Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN6Q9Y6Q1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN6Q9Y6Q1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 AC132938.6-201ENST00000623828 1655 ntBASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CAPN6Q9Y6Q1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 FAM197Y4-202ENST00000622692 608 ntBASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 CR769767.2-201ENST00000622735 460 ntBASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 AC124067.4-201ENST00000519691 2379 ntBASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN6Q9Y6Q1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms