Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 ECEL1P3-201ENST00000427961 737 ntBASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 AC024243.1-201ENST00000609234 778 ntBASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 AC092865.7-201ENST00000641832 219 ntBASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 REXO1L9P-201ENST00000604264 2108 ntBASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 PHGDH-209ENST00000641074 1780 ntBASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 AC138028.4-201ENST00000564984 1845 ntBASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 AC079416.2-201ENST00000625035 1193 ntBASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA11Q9Y5H2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 AL096828.2-201ENST00000567259 1965 ntBASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA11Q9Y5H2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms