Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 POM121L13P-201ENST00000422362 380 ntBASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 KRT18P55-202ENST00000578578 1546 ntBASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGB1Q9Y5G3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB1Q9Y5G3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGB1Q9Y5G3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms