Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC138028.4-201ENST00000564984 1845 ntBASIC19.35■□□□□ 0.69
CISHQ9NSE2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CISHQ9NSE2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CISHQ9NSE2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CISHQ9NSE2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CISHQ9NSE2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CISHQ9NSE2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 AL390719.2-201ENST00000606993 987 ntBASIC19.35■□□□□ 0.69
CISHQ9NSE2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 Z83836.1-201ENST00000624605 1642 ntBASIC19.35■□□□□ 0.69
CISHQ9NSE2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CISHQ9NSE2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.35■□□□□ 0.69
CISHQ9NSE2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CISHQ9NSE2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 AP000997.3-201ENST00000623333 2250 ntBASIC19.34■□□□□ 0.69
CISHQ9NSE2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 ARMC10P1-201ENST00000313754 855 ntBASIC19.34■□□□□ 0.69
CISHQ9NSE2 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CISHQ9NSE2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.34■□□□□ 0.69
CISHQ9NSE2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CISHQ9NSE2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CISHQ9NSE2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CISHQ9NSE2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CISHQ9NSE2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CISHQ9NSE2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CISHQ9NSE2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.33■□□□□ 0.69
CISHQ9NSE2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.33■□□□□ 0.69
CISHQ9NSE2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CISHQ9NSE2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.33■□□□□ 0.69
CISHQ9NSE2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CISHQ9NSE2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.33■□□□□ 0.69
CISHQ9NSE2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CISHQ9NSE2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CISHQ9NSE2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CISHQ9NSE2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CISHQ9NSE2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CISHQ9NSE2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 AC011498.5-201ENST00000592027 486 ntBASIC19.33■□□□□ 0.68
CISHQ9NSE2 FLJ13224-201ENST00000313737 1514 ntBASIC19.33■□□□□ 0.68
CISHQ9NSE2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CISHQ9NSE2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 NOC2LP1-202ENST00000452600 2235 ntBASIC19.33■□□□□ 0.68
CISHQ9NSE2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CISHQ9NSE2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CISHQ9NSE2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CISHQ9NSE2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CISHQ9NSE2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.33■□□□□ 0.68
CISHQ9NSE2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 AL353692.3-201ENST00000407031 1396 ntBASIC19.32■□□□□ 0.68
CISHQ9NSE2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms