Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 AL391807.1-203ENST00000604392 2365 ntBASIC15.88■□□□□ 0.13
CDH20Q9HBT6 SDHAP2-201ENST00000455183 2001 ntBASIC15.88■□□□□ 0.13
CDH20Q9HBT6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH20Q9HBT6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 AC010331.1-201ENST00000611423 582 ntBASIC15.87■□□□□ 0.13
CDH20Q9HBT6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH20Q9HBT6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 AC092597.1-201ENST00000487352 616 ntBASIC15.86■□□□□ 0.13
CDH20Q9HBT6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 ZNF444P1-201ENST00000559497 298 ntBASIC15.86■□□□□ 0.13
CDH20Q9HBT6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms