Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 KRT18P55-202ENST00000578578 1546 ntBASIC19.15■□□□□ 0.66
LHX5Q9H2C1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.14■□□□□ 0.66
LHX5Q9H2C1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LHX5Q9H2C1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.14■□□□□ 0.66
LHX5Q9H2C1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 AP003733.1-201ENST00000491725 852 ntBASIC19.14■□□□□ 0.65
LHX5Q9H2C1 VENTXP5-201ENST00000523979 775 ntBASIC19.14■□□□□ 0.65
LHX5Q9H2C1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.14■□□□□ 0.65
LHX5Q9H2C1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX5Q9H2C1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 AC004263.2-201ENST00000617183 678 ntBASIC19.13■□□□□ 0.65
LHX5Q9H2C1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 AP000550.4-202ENST00000639755 178 ntBASIC19.13■□□□□ 0.65
LHX5Q9H2C1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX5Q9H2C1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 KRT18P65-201ENST00000439811 1286 ntBASIC19.12■□□□□ 0.65
LHX5Q9H2C1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms