Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 AL390955.1-201ENST00000428694 934 ntBASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 CA15P1-201ENST00000481698 905 ntBASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 AC073592.3-201ENST00000625118 1834 ntBASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CHRDL1Q9BU40 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 MCCD1P1-208ENST00000445732 328 ntBASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 AL355075.4-201ENST00000554988 638 ntBASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 AC012313.1-201ENST00000593393 3059 ntBASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 GNAS-203ENST00000306120 1878 ntBASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRDL1Q9BU40 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 KRT17P2-201ENST00000300992 1314 ntBASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms