Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.22■□□□□ 0.51
NDNQ99608 NAPSB-206ENST00000562112 1266 ntBASIC18.22■□□□□ 0.51
NDNQ99608 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 AC010653.2-201ENST00000623505 997 ntBASIC18.22■□□□□ 0.51
NDNQ99608 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.22■□□□□ 0.51
NDNQ99608 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NDNQ99608 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.22■□□□□ 0.51
NDNQ99608 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDNQ99608 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NDNQ99608 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.21■□□□□ 0.51
NDNQ99608 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NDNQ99608 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 MMP23A-201ENST00000234610 1017 ntBASIC18.21■□□□□ 0.51
NDNQ99608 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NDNQ99608 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 AC112497.1-201ENST00000624824 639 ntBASIC18.21■□□□□ 0.51
NDNQ99608 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NDNQ99608 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.21■□□□□ 0.51
NDNQ99608 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDNQ99608 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NDNQ99608 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.21■□□□□ 0.5
NDNQ99608 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.2■□□□□ 0.5
NDNQ99608 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.2■□□□□ 0.5
NDNQ99608 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.2■□□□□ 0.5
NDNQ99608 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.2■□□□□ 0.5
NDNQ99608 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NDNQ99608 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.2■□□□□ 0.5
NDNQ99608 ECEL1P2-202ENST00000465689 757 ntBASIC18.2■□□□□ 0.5
NDNQ99608 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.2■□□□□ 0.5
NDNQ99608 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.2■□□□□ 0.5
NDNQ99608 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 KRT8P7-201ENST00000533003 1432 ntBASIC18.2■□□□□ 0.5
NDNQ99608 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.2■□□□□ 0.5
NDNQ99608 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.2■□□□□ 0.5
NDNQ99608 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDNQ99608 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
NDNQ99608 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
NDNQ99608 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.19■□□□□ 0.5
NDNQ99608 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.19■□□□□ 0.5
NDNQ99608 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
NDNQ99608 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.19■□□□□ 0.5
NDNQ99608 AC128688.1-201ENST00000487626 519 ntBASIC18.19■□□□□ 0.5
NDNQ99608 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.19■□□□□ 0.5
NDNQ99608 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.19■□□□□ 0.5
NDNQ99608 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.19■□□□□ 0.5
NDNQ99608 FAM87A-204ENST00000613235 858 ntBASIC18.19■□□□□ 0.5
NDNQ99608 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.19■□□□□ 0.5
NDNQ99608 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
NDNQ99608 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms