Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 AC004263.2-201ENST00000617183 678 ntBASIC19.45■□□□□ 0.7
LMO3Q8TAP4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 AC026471.1-201ENST00000564629 3026 ntBASIC19.45■□□□□ 0.7
LMO3Q8TAP4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.45■□□□□ 0.7
LMO3Q8TAP4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 LETM1P2-201ENST00000597330 2178 ntBASIC19.44■□□□□ 0.7
LMO3Q8TAP4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 KRT18P48-201ENST00000434763 852 ntBASIC19.44■□□□□ 0.7
LMO3Q8TAP4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 AC022616.7-201ENST00000525383 220 ntBASIC19.44■□□□□ 0.7
LMO3Q8TAP4 AC083849.1-201ENST00000615227 514 ntBASIC19.44■□□□□ 0.7
LMO3Q8TAP4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.44■□□□□ 0.7
LMO3Q8TAP4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LMO3Q8TAP4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 GNAS-203ENST00000306120 1878 ntBASIC19.43■□□□□ 0.7
LMO3Q8TAP4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 IGHGP-201ENST00000390555 1178 ntBASIC19.43■□□□□ 0.7
LMO3Q8TAP4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 TMPOP1-202ENST00000424642 1267 ntBASIC19.43■□□□□ 0.7
LMO3Q8TAP4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.43■□□□□ 0.7
LMO3Q8TAP4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 LINC00896-202ENST00000609602 2128 ntBASIC19.42■□□□□ 0.7
LMO3Q8TAP4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.42■□□□□ 0.7
LMO3Q8TAP4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMO3Q8TAP4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms