Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC01006Q8NI28 AC104109.2-201ENST00000602919 1418 ntBASIC14.08□□□□□ -0.15
LINC01006Q8NI28 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.08□□□□□ -0.16
LINC01006Q8NI28 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 AL139288.1-201ENST00000623748 933 ntBASIC14.08□□□□□ -0.16
LINC01006Q8NI28 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 AC005082.1-201ENST00000413042 2259 ntBASIC14.08□□□□□ -0.16
LINC01006Q8NI28 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01006Q8NI28 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 AC092910.1-201ENST00000482027 1129 ntBASIC14.07□□□□□ -0.16
LINC01006Q8NI28 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 AC073130.3-201ENST00000624389 2278 ntBASIC14.07□□□□□ -0.16
LINC01006Q8NI28 AC116562.4-201ENST00000641316 2276 ntBASIC14.07□□□□□ -0.16
LINC01006Q8NI28 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01006Q8NI28 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 AC098831.1-202ENST00000438821 336 ntBASIC14.06□□□□□ -0.16
LINC01006Q8NI28 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 AC025062.2-201ENST00000605477 670 ntBASIC14.06□□□□□ -0.16
LINC01006Q8NI28 AC027601.4-201ENST00000611259 610 ntBASIC14.06□□□□□ -0.16
LINC01006Q8NI28 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01006Q8NI28 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms