Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA6Q8N139 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA6Q8N139 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
ABCA6Q8N139 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA6Q8N139 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA6Q8N139 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA6Q8N139 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA6Q8N139 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA6Q8N139 PDPK2P-202ENST00000562415 1191 ntBASIC26.74■■□□□ 1.87
ABCA6Q8N139 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC26.74■■□□□ 1.87
ABCA6Q8N139 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC26.74■■□□□ 1.87
ABCA6Q8N139 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ABCA6Q8N139 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA6Q8N139 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
ABCA6Q8N139 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC26.73■■□□□ 1.87
ABCA6Q8N139 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA6Q8N139 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC26.73■■□□□ 1.87
ABCA6Q8N139 AP000344.2-201ENST00000512987 629 ntBASIC26.73■■□□□ 1.87
ABCA6Q8N139 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA6Q8N139 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC26.73■■□□□ 1.87
ABCA6Q8N139 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA6Q8N139 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA6Q8N139 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC26.73■■□□□ 1.87
ABCA6Q8N139 AL032819.2-201ENST00000624543 2162 ntBASIC26.73■■□□□ 1.87
ABCA6Q8N139 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ABCA6Q8N139 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 MIR770-201ENST00000390219 98 ntBASIC26.72■■□□□ 1.87
ABCA6Q8N139 CRYGEP-201ENST00000412192 528 ntBASIC26.72■■□□□ 1.87
ABCA6Q8N139 SLC4A1APP2-201ENST00000424054 1259 ntBASIC26.72■■□□□ 1.87
ABCA6Q8N139 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 MAL2-202ENST00000531508 892 ntTSL 3 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 AC004706.3-202ENST00000621574 984 ntBASIC26.72■■□□□ 1.87
ABCA6Q8N139 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
ABCA6Q8N139 CD9-202ENST00000382515 1229 ntTSL 5 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 ARTN-206ENST00000472435 402 ntTSL 3 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 MED29-202ENST00000594368 1471 ntTSL 2 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC26.72■■□□□ 1.87
ABCA6Q8N139 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA6Q8N139 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC26.71■■□□□ 1.87
ABCA6Q8N139 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA6Q8N139 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC26.71■■□□□ 1.87
ABCA6Q8N139 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC26.71■■□□□ 1.87
ABCA6Q8N139 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA6Q8N139 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA6Q8N139 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA6Q8N139 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC26.71■■□□□ 1.87
ABCA6Q8N139 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA6Q8N139 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC26.71■■□□□ 1.87
ABCA6Q8N139 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC26.71■■□□□ 1.87
ABCA6Q8N139 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA6Q8N139 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA6Q8N139 AL031432.2-201ENST00000566714 459 ntBASIC26.71■■□□□ 1.87
ABCA6Q8N139 AL928711.1-201ENST00000570165 459 ntBASIC26.71■■□□□ 1.87
ABCA6Q8N139 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC26.71■■□□□ 1.87
ABCA6Q8N139 NCF1C-201ENST00000438382 1427 ntBASIC26.71■■□□□ 1.87
ABCA6Q8N139 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ABCA6Q8N139 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC26.7■■□□□ 1.87
ABCA6Q8N139 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC26.7■■□□□ 1.87
ABCA6Q8N139 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ABCA6Q8N139 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ABCA6Q8N139 AL139400.1-201ENST00000366220 510 ntBASIC26.7■■□□□ 1.86
ABCA6Q8N139 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC26.7■■□□□ 1.86
ABCA6Q8N139 PRYP5-201ENST00000451909 266 ntBASIC26.7■■□□□ 1.86
ABCA6Q8N139 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC26.7■■□□□ 1.86
ABCA6Q8N139 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
ABCA6Q8N139 AL589182.2-201ENST00000619332 1049 ntBASIC26.7■■□□□ 1.86
ABCA6Q8N139 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
ABCA6Q8N139 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ABCA6Q8N139 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ABCA6Q8N139 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC26.7■■□□□ 1.86
ABCA6Q8N139 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
ABCA6Q8N139 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC26.7■■□□□ 1.86
ABCA6Q8N139 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ABCA6Q8N139 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
ABCA6Q8N139 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC26.7■■□□□ 1.86
ABCA6Q8N139 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA6Q8N139 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA6Q8N139 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA6Q8N139 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
ABCA6Q8N139 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA6Q8N139 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA6Q8N139 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms