Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 AC008894.3-201ENST00000624324 3103 ntBASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM42Q8IWZ5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 MIR564-202ENST00000385049 94 ntBASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 KRT16P5-201ENST00000455284 522 ntBASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM42Q8IWZ5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 PCDHA12-202ENST00000613593 2588 ntBASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM42Q8IWZ5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms