Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.81■□□□□ 0.28
VRK2Q86Y07 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
VRK2Q86Y07 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK2Q86Y07 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 LINC01568-207ENST00000641790 1380 ntBASIC16.8■□□□□ 0.28
VRK2Q86Y07 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK2Q86Y07 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.8■□□□□ 0.28
VRK2Q86Y07 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 AC012317.2-201ENST00000623305 2251 ntBASIC16.79■□□□□ 0.28
VRK2Q86Y07 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 AC066615.1-201ENST00000640911 628 ntBASIC16.79■□□□□ 0.28
VRK2Q86Y07 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VRK2Q86Y07 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK2Q86Y07 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 LINC00896-202ENST00000609602 2128 ntBASIC16.78■□□□□ 0.28
VRK2Q86Y07 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms