Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 AC068880.1-201ENST00000507289 2297 ntBASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PTPN20Q4JDL3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 AL049597.2-201ENST00000565575 961 ntBASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 LINC01238-205ENST00000567549 1107 ntBASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 AC004263.2-201ENST00000617183 678 ntBASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.09■□□□□ 0.65
PTPN20Q4JDL3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
PTPN20Q4JDL3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN20Q4JDL3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.08■□□□□ 0.65
PTPN20Q4JDL3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN20Q4JDL3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN20Q4JDL3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN20Q4JDL3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN20Q4JDL3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms