Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC6LQ2NKX8 LINC00554-201ENST00000564841 3011 ntBASIC19.25■□□□□ 0.67
ERCC6LQ2NKX8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 AC011767.1-201ENST00000617410 1153 ntBASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ERCC6LQ2NKX8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 RAP2CP1-201ENST00000605103 478 ntBASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC6LQ2NKX8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 AL512625.2-201ENST00000417533 625 ntBASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 KRT8P3-201ENST00000519669 1449 ntBASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 AC099343.3-201ENST00000605834 2503 ntBASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 HTR7P1-201ENST00000538670 1336 ntBASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC6LQ2NKX8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms