Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.45■□□□□ 0.22
GDF1P27539 AC233702.3-201ENST00000578656 1387 ntBASIC16.45■□□□□ 0.22
GDF1P27539 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.45■□□□□ 0.22
GDF1P27539 AC093503.3-201ENST00000624917 2352 ntBASIC16.45■□□□□ 0.22
GDF1P27539 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.45■□□□□ 0.22
GDF1P27539 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
GDF1P27539 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
GDF1P27539 ESPNP-201ENST00000270691 2015 ntBASIC16.45■□□□□ 0.22
GDF1P27539 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.45■□□□□ 0.22
GDF1P27539 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GDF1P27539 AC073592.3-201ENST00000625118 1834 ntBASIC16.45■□□□□ 0.22
GDF1P27539 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
GDF1P27539 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 WIZP1-201ENST00000531444 2299 ntBASIC16.44■□□□□ 0.22
GDF1P27539 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
GDF1P27539 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.44■□□□□ 0.22
GDF1P27539 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
GDF1P27539 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.44■□□□□ 0.22
GDF1P27539 AL450487.1-201ENST00000426799 995 ntBASIC16.44■□□□□ 0.22
GDF1P27539 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GDF1P27539 RN7SL606P-201ENST00000472779 293 ntBASIC16.44■□□□□ 0.22
GDF1P27539 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.44■□□□□ 0.22
GDF1P27539 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.44■□□□□ 0.22
GDF1P27539 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.44■□□□□ 0.22
GDF1P27539 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.44■□□□□ 0.22
GDF1P27539 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.44■□□□□ 0.22
GDF1P27539 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.44■□□□□ 0.22
GDF1P27539 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.44■□□□□ 0.22
GDF1P27539 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.44■□□□□ 0.22
GDF1P27539 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDF1P27539 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GDF1P27539 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
GDF1P27539 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
GDF1P27539 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.43■□□□□ 0.22
GDF1P27539 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.43■□□□□ 0.22
GDF1P27539 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
GDF1P27539 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
GDF1P27539 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
GDF1P27539 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.43■□□□□ 0.22
GDF1P27539 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GDF1P27539 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.43■□□□□ 0.22
GDF1P27539 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GDF1P27539 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDF1P27539 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
GDF1P27539 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
GDF1P27539 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GDF1P27539 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.42■□□□□ 0.22
GDF1P27539 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms