Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.8■■□□□ 1.08
CHGBP05060 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.8■■□□□ 1.08
CHGBP05060 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.8■■□□□ 1.08
CHGBP05060 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CHGBP05060 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHGBP05060 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CHGBP05060 KRT18P1-202ENST00000452408 1331 ntBASIC21.8■■□□□ 1.08
CHGBP05060 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.79■■□□□ 1.08
CHGBP05060 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.79■■□□□ 1.08
CHGBP05060 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.79■■□□□ 1.08
CHGBP05060 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.79■■□□□ 1.08
CHGBP05060 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.79■■□□□ 1.08
CHGBP05060 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 HCG4P8-203ENST00000443049 980 ntBASIC21.79■■□□□ 1.08
CHGBP05060 AC068472.1-201ENST00000474589 881 ntBASIC21.79■■□□□ 1.08
CHGBP05060 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.79■■□□□ 1.08
CHGBP05060 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.79■■□□□ 1.08
CHGBP05060 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.79■■□□□ 1.08
CHGBP05060 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.79■■□□□ 1.08
CHGBP05060 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CHGBP05060 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.79■■□□□ 1.08
CHGBP05060 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
CHGBP05060 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CHGBP05060 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHGBP05060 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGBP05060 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
CHGBP05060 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.78■■□□□ 1.08
CHGBP05060 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.78■■□□□ 1.08
CHGBP05060 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CHGBP05060 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CHGBP05060 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.78■■□□□ 1.08
CHGBP05060 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 IGHV3-41-201ENST00000613121 348 ntBASIC21.78■■□□□ 1.08
CHGBP05060 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.78■■□□□ 1.08
CHGBP05060 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.78■■□□□ 1.08
CHGBP05060 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CHGBP05060 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.78■■□□□ 1.08
CHGBP05060 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHGBP05060 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHGBP05060 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGBP05060 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.78■■□□□ 1.08
CHGBP05060 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.77■■□□□ 1.08
CHGBP05060 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.77■■□□□ 1.08
CHGBP05060 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CHGBP05060 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHGBP05060 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CHGBP05060 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.77■■□□□ 1.08
CHGBP05060 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.77■■□□□ 1.08
CHGBP05060 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CHGBP05060 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 TOB2P1-201ENST00000469761 992 ntBASIC21.77■■□□□ 1.08
CHGBP05060 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.77■■□□□ 1.08
CHGBP05060 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
CHGBP05060 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.77■■□□□ 1.08
CHGBP05060 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.77■■□□□ 1.08
CHGBP05060 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHGBP05060 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGBP05060 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CHGBP05060 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.77■■□□□ 1.07
CHGBP05060 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CHGBP05060 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHGBP05060 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CHGBP05060 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms