Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.06■□□□□ 0.48
CAPNS1P04632 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CAPNS1P04632 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CAPNS1P04632 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.06■□□□□ 0.48
CAPNS1P04632 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.06■□□□□ 0.48
CAPNS1P04632 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.06■□□□□ 0.48
CAPNS1P04632 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 AC012615.1-201ENST00000565797 1299 ntBASIC18.06■□□□□ 0.48
CAPNS1P04632 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CAPNS1P04632 LINC01711-201ENST00000598340 967 ntBASIC18.06■□□□□ 0.48
CAPNS1P04632 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPNS1P04632 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CAPNS1P04632 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CAPNS1P04632 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPNS1P04632 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPNS1P04632 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPNS1P04632 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CAPNS1P04632 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPNS1P04632 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.05■□□□□ 0.48
CAPNS1P04632 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 FAM220CP-201ENST00000395253 831 ntBASIC18.05■□□□□ 0.48
CAPNS1P04632 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.05■□□□□ 0.48
CAPNS1P04632 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.05■□□□□ 0.48
CAPNS1P04632 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CAPNS1P04632 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPNS1P04632 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPNS1P04632 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CAPNS1P04632 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.05■□□□□ 0.48
CAPNS1P04632 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CAPNS1P04632 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPNS1P04632 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CAPNS1P04632 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 IL9RP2-201ENST00000423948 1312 ntBASIC18.04■□□□□ 0.48
CAPNS1P04632 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CAPNS1P04632 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.04■□□□□ 0.48
CAPNS1P04632 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.04■□□□□ 0.48
CAPNS1P04632 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.04■□□□□ 0.48
CAPNS1P04632 AC034232.1-201ENST00000506026 1064 ntBASIC18.04■□□□□ 0.48
CAPNS1P04632 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.04■□□□□ 0.48
CAPNS1P04632 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPNS1P04632 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CAPNS1P04632 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CAPNS1P04632 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPNS1P04632 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CAPNS1P04632 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPNS1P04632 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPNS1P04632 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPNS1P04632 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
CAPNS1P04632 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPNS1P04632 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.03■□□□□ 0.48
CAPNS1P04632 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPNS1P04632 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPNS1P04632 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPNS1P04632 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPNS1P04632 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms