Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.77■□□□□ 0.28
NKX2-2O95096 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.77■□□□□ 0.28
NKX2-2O95096 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.77■□□□□ 0.28
NKX2-2O95096 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.77■□□□□ 0.28
NKX2-2O95096 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NKX2-2O95096 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.77■□□□□ 0.28
NKX2-2O95096 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.77■□□□□ 0.28
NKX2-2O95096 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NKX2-2O95096 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.77■□□□□ 0.27
NKX2-2O95096 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX2-2O95096 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX2-2O95096 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NKX2-2O95096 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NKX2-2O95096 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NKX2-2O95096 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX2-2O95096 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX2-2O95096 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX2-2O95096 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX2-2O95096 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 LINC00602-201ENST00000629776 2065 ntBASIC16.76■□□□□ 0.27
NKX2-2O95096 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX2-2O95096 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX2-2O95096 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.76■□□□□ 0.27
NKX2-2O95096 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.76■□□□□ 0.27
NKX2-2O95096 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.76■□□□□ 0.27
NKX2-2O95096 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
NKX2-2O95096 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NKX2-2O95096 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX2-2O95096 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX2-2O95096 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX2-2O95096 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
NKX2-2O95096 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NKX2-2O95096 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-2O95096 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
NKX2-2O95096 KRT18P55-202ENST00000578578 1546 ntBASIC16.75■□□□□ 0.27
NKX2-2O95096 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NKX2-2O95096 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.75■□□□□ 0.27
NKX2-2O95096 AC068880.1-201ENST00000507289 2297 ntBASIC16.75■□□□□ 0.27
NKX2-2O95096 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.75■□□□□ 0.27
NKX2-2O95096 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX2-2O95096 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NKX2-2O95096 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.75■□□□□ 0.27
NKX2-2O95096 LINC01238-205ENST00000567549 1107 ntBASIC16.75■□□□□ 0.27
NKX2-2O95096 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.75■□□□□ 0.27
NKX2-2O95096 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX2-2O95096 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NKX2-2O95096 LINC01311-201ENST00000565162 1445 ntBASIC16.75■□□□□ 0.27
NKX2-2O95096 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.75■□□□□ 0.27
NKX2-2O95096 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NKX2-2O95096 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX2-2O95096 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
NKX2-2O95096 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX2-2O95096 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
NKX2-2O95096 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX2-2O95096 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
NKX2-2O95096 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-2O95096 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NKX2-2O95096 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms