Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.2■□□□□ 0.18
CYTIPO60759 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.2■□□□□ 0.18
CYTIPO60759 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CYTIPO60759 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CYTIPO60759 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.19■□□□□ 0.18
CYTIPO60759 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CYTIPO60759 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CYTIPO60759 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CYTIPO60759 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.19■□□□□ 0.18
CYTIPO60759 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CYTIPO60759 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CYTIPO60759 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CYTIPO60759 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.19■□□□□ 0.18
CYTIPO60759 TSPY22P-201ENST00000427496 604 ntBASIC16.19■□□□□ 0.18
CYTIPO60759 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.19■□□□□ 0.18
CYTIPO60759 KRT8P26-201ENST00000534154 1276 ntBASIC16.19■□□□□ 0.18
CYTIPO60759 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.19■□□□□ 0.18
CYTIPO60759 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CYTIPO60759 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.19■□□□□ 0.18
CYTIPO60759 AC004263.2-201ENST00000617183 678 ntBASIC16.19■□□□□ 0.18
CYTIPO60759 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.19■□□□□ 0.18
CYTIPO60759 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CYTIPO60759 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CYTIPO60759 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYTIPO60759 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.19■□□□□ 0.18
CYTIPO60759 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CYTIPO60759 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.19■□□□□ 0.18
CYTIPO60759 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.18■□□□□ 0.18
CYTIPO60759 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.18■□□□□ 0.18
CYTIPO60759 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.18■□□□□ 0.18
CYTIPO60759 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 AL353692.3-201ENST00000407031 1396 ntBASIC16.18■□□□□ 0.18
CYTIPO60759 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CYTIPO60759 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.18■□□□□ 0.18
CYTIPO60759 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.18■□□□□ 0.18
CYTIPO60759 AL121672.3-201ENST00000608644 468 ntBASIC16.18■□□□□ 0.18
CYTIPO60759 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.18■□□□□ 0.18
CYTIPO60759 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.18■□□□□ 0.18
CYTIPO60759 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CYTIPO60759 AC009113.1-201ENST00000570267 2443 ntBASIC16.18■□□□□ 0.18
CYTIPO60759 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CYTIPO60759 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 AC093677.2-201ENST00000600169 1863 ntBASIC16.18■□□□□ 0.18
CYTIPO60759 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 PHGDH-209ENST00000641074 1780 ntBASIC16.18■□□□□ 0.18
CYTIPO60759 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.18■□□□□ 0.18
CYTIPO60759 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.18■□□□□ 0.18
CYTIPO60759 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CYTIPO60759 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CYTIPO60759 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CYTIPO60759 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CYTIPO60759 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 LTB4R2-202ENST00000528054 3092 ntBASIC16.17■□□□□ 0.18
CYTIPO60759 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.17■□□□□ 0.18
CYTIPO60759 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.17■□□□□ 0.18
CYTIPO60759 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.17■□□□□ 0.18
CYTIPO60759 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
CYTIPO60759 BX276092.5-203ENST00000456199 560 ntBASIC16.17■□□□□ 0.18
CYTIPO60759 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CYTIPO60759 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms