Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
PCDH7O60245 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDH7O60245 SLC25A6P5-201ENST00000435663 894 ntBASIC17.37■□□□□ 0.37
PCDH7O60245 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDH7O60245 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDH7O60245 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH7O60245 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH7O60245 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PCDH7O60245 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH7O60245 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH7O60245 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH7O60245 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDH7O60245 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH7O60245 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
PCDH7O60245 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH7O60245 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH7O60245 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 AP000997.3-201ENST00000623333 2250 ntBASIC17.36■□□□□ 0.37
PCDH7O60245 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH7O60245 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PCDH7O60245 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH7O60245 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH7O60245 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 AC145285.6-201ENST00000604632 637 ntBASIC17.36■□□□□ 0.37
PCDH7O60245 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH7O60245 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDH7O60245 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH7O60245 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH7O60245 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH7O60245 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDH7O60245 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH7O60245 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDH7O60245 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 OR6D1P-202ENST00000641007 5290 ntBASIC17.35■□□□□ 0.37
PCDH7O60245 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH7O60245 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH7O60245 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.35■□□□□ 0.37
PCDH7O60245 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH7O60245 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH7O60245 MIR3917-201ENST00000580971 93 ntBASIC17.35■□□□□ 0.37
PCDH7O60245 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH7O60245 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH7O60245 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDH7O60245 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH7O60245 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDH7O60245 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCDH7O60245 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH7O60245 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDH7O60245 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH7O60245 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDH7O60245 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH7O60245 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCDH7O60245 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDH7O60245 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDH7O60245 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDH7O60245 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH7O60245 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms