Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ABCD4O14678 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.09■□□□□ 0.17
ABCD4O14678 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ABCD4O14678 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ABCD4O14678 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.09■□□□□ 0.17
ABCD4O14678 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ABCD4O14678 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.09■□□□□ 0.17
ABCD4O14678 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.09■□□□□ 0.17
ABCD4O14678 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.09■□□□□ 0.17
ABCD4O14678 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ABCD4O14678 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ABCD4O14678 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ABCD4O14678 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ABCD4O14678 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ABCD4O14678 AC034236.2-201ENST00000606662 1610 ntBASIC16.08■□□□□ 0.17
ABCD4O14678 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ABCD4O14678 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ABCD4O14678 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ABCD4O14678 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ABCD4O14678 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ABCD4O14678 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ABCD4O14678 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ABCD4O14678 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.08■□□□□ 0.16
ABCD4O14678 AL645929.1-201ENST00000420084 975 ntBASIC16.08■□□□□ 0.16
ABCD4O14678 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.08■□□□□ 0.16
ABCD4O14678 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.08■□□□□ 0.16
ABCD4O14678 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.08■□□□□ 0.16
ABCD4O14678 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.08■□□□□ 0.16
ABCD4O14678 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.08■□□□□ 0.16
ABCD4O14678 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.08■□□□□ 0.16
ABCD4O14678 HOXB1-202ENST00000577092 1414 ntBASIC16.08■□□□□ 0.16
ABCD4O14678 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ABCD4O14678 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ABCD4O14678 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.08■□□□□ 0.16
ABCD4O14678 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ABCD4O14678 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD4O14678 CROCCP3-202ENST00000420820 1947 ntBASIC16.07■□□□□ 0.16
ABCD4O14678 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ABCD4O14678 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.07■□□□□ 0.16
ABCD4O14678 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ABCD4O14678 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ABCD4O14678 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ABCD4O14678 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 SPDYE13P-201ENST00000445314 798 ntBASIC16.07■□□□□ 0.16
ABCD4O14678 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.07■□□□□ 0.16
ABCD4O14678 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.07■□□□□ 0.16
ABCD4O14678 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.07■□□□□ 0.16
ABCD4O14678 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.07■□□□□ 0.16
ABCD4O14678 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.07■□□□□ 0.16
ABCD4O14678 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.07■□□□□ 0.16
ABCD4O14678 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.07■□□□□ 0.16
ABCD4O14678 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.07■□□□□ 0.16
ABCD4O14678 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ABCD4O14678 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
ABCD4O14678 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.07■□□□□ 0.16
ABCD4O14678 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.07■□□□□ 0.16
ABCD4O14678 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD4O14678 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ABCD4O14678 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD4O14678 AL391005.1-201ENST00000623953 2435 ntBASIC16.06■□□□□ 0.16
ABCD4O14678 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
ABCD4O14678 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ABCD4O14678 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.06■□□□□ 0.16
ABCD4O14678 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD4O14678 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD4O14678 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.06■□□□□ 0.16
ABCD4O14678 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD4O14678 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD4O14678 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.06■□□□□ 0.16
ABCD4O14678 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD4O14678 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD4O14678 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD4O14678 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms