Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC022898.2-201ENST00000616822 1312 ntBASIC18.37■□□□□ 0.53
AP3B1O00203 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP3B1O00203 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3B1O00203 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.37■□□□□ 0.53
AP3B1O00203 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3B1O00203 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
AP3B1O00203 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 AC034232.1-201ENST00000506026 1064 ntBASIC18.36■□□□□ 0.53
AP3B1O00203 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.36■□□□□ 0.53
AP3B1O00203 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.36■□□□□ 0.53
AP3B1O00203 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.36■□□□□ 0.53
AP3B1O00203 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
AP3B1O00203 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.36■□□□□ 0.53
AP3B1O00203 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
AP3B1O00203 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
AP3B1O00203 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3B1O00203 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.36■□□□□ 0.53
AP3B1O00203 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
AP3B1O00203 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 AP000997.3-201ENST00000623333 2250 ntBASIC18.35■□□□□ 0.53
AP3B1O00203 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.35■□□□□ 0.53
AP3B1O00203 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AP3B1O00203 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
AP3B1O00203 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
AP3B1O00203 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.35■□□□□ 0.53
AP3B1O00203 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.35■□□□□ 0.53
AP3B1O00203 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3B1O00203 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3B1O00203 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3B1O00203 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
AP3B1O00203 AC134043.2-201ENST00000624206 2238 ntBASIC18.34■□□□□ 0.53
AP3B1O00203 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.34■□□□□ 0.53
AP3B1O00203 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3B1O00203 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3B1O00203 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.34■□□□□ 0.53
AP3B1O00203 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.34■□□□□ 0.53
AP3B1O00203 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3B1O00203 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.34■□□□□ 0.53
AP3B1O00203 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.34■□□□□ 0.53
AP3B1O00203 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3B1O00203 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3B1O00203 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3B1O00203 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.34■□□□□ 0.53
AP3B1O00203 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms