Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 AC004967.1-201ENST00000453589 447 ntBASIC20.67■□□□□ 0.9
LOC285556D6RIA3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LOC285556D6RIA3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.66■□□□□ 0.9
LOC285556D6RIA3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 AC097374.2-201ENST00000618617 1306 ntBASIC20.65■□□□□ 0.9
LOC285556D6RIA3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LOC285556D6RIA3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 AC136632.2-201ENST00000512891 861 ntBASIC20.64■□□□□ 0.9
LOC285556D6RIA3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LOC285556D6RIA3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 AC002310.6-201ENST00000624451 1377 ntBASIC20.64■□□□□ 0.89
LOC285556D6RIA3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 DNAJB3-202ENST00000449667 1266 ntBASIC20.64■□□□□ 0.89
LOC285556D6RIA3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 AL022326.1-202ENST00000641533 845 ntBASIC20.64■□□□□ 0.89
LOC285556D6RIA3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LOC285556D6RIA3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 SPDYE21P-201ENST00000413323 827 ntBASIC20.63■□□□□ 0.89
LOC285556D6RIA3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.63■□□□□ 0.89
LOC285556D6RIA3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms