Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV8-6A0A0B4J262 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 AC141586.3-201ENST00000562166 1838 ntBASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 KRASP1-201ENST00000407852 552 ntBASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 AC128676.1-201ENST00000454392 318 ntBASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 FAM197Y4-202ENST00000622692 608 ntBASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 AL023875.1-201ENST00000640777 796 ntBASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 AL512353.2-201ENST00000448759 1962 ntBASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV8-6A0A0B4J262 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 KRT8P8-201ENST00000434750 1448 ntBASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 MIR4651-201ENST00000582622 73 ntBASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 AC022211.2-201ENST00000585075 2527 ntBASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV8-6A0A0B4J262 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms