Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PCDHB13Q9Y5F0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB13Q9Y5F0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 AC112907.2-201ENST00000448639 330 ntBASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 AC092597.1-201ENST00000487352 616 ntBASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 AC024563.2-201ENST00000603282 481 ntBASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.08■□□□□ 0.81
PCDHB13Q9Y5F0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB13Q9Y5F0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB13Q9Y5F0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDHB13Q9Y5F0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHB13Q9Y5F0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 AL049597.2-201ENST00000565575 961 ntBASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB13Q9Y5F0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms