Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SPG7Q9UQ90 AC116562.4-201ENST00000641316 2276 ntBASIC23.68■■□□□ 1.38
SPG7Q9UQ90 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 AL356309.3-201ENST00000624132 1934 ntBASIC23.68■■□□□ 1.38
SPG7Q9UQ90 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPG7Q9UQ90 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 FABP5-202ENST00000396359 986 ntTSL 5 BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 CTNS-203ENST00000399306 803 ntTSL 3 BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.67■■□□□ 1.38
SPG7Q9UQ90 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SPG7Q9UQ90 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 MIR940-201ENST00000401276 94 ntBASIC23.66■■□□□ 1.38
SPG7Q9UQ90 RPS2P1-201ENST00000434010 821 ntBASIC23.66■■□□□ 1.38
SPG7Q9UQ90 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 AC092865.5-201ENST00000545435 363 ntBASIC23.66■■□□□ 1.38
SPG7Q9UQ90 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPG7Q9UQ90 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 IGHV3-22-201ENST00000520721 359 ntBASIC23.65■■□□□ 1.38
SPG7Q9UQ90 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SPG7Q9UQ90 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SPG7Q9UQ90 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SPG7Q9UQ90 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SPG7Q9UQ90 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SPG7Q9UQ90 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
SPG7Q9UQ90 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.38
SPG7Q9UQ90 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 AC145285.3-201ENST00000564603 959 ntBASIC23.64■■□□□ 1.37
SPG7Q9UQ90 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms